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R

  1. R Programming for Data Science

    This book brings the fundamentals of R programming to you, using the same material developed as part of the industry-leading Johns Hopkins Data Science Specialization. The skills taught in this book will lay the foundation for you to begin your journey learning data science. Printed copies of this book are available through Lulu.

  2. Applied Data Science for Credit Risk
    Applied Data Science for Credit Risk
    A Practical Guide in R and Python
    Andrija Djurovic

    This book provides a practical guide to critical data science methods, focusing on their application in credit risk management. Using examples in R and Python, it presents step-by-step processes for applying various analytical techniques while highlighting the importance of aligning methods with the specific characteristics of the data. Designed for practitioners and those with foundational data science and banking knowledge, the book bridges theory and practice with real-world examples.

  3. Methods in Biostatistics with R
    Methods in Biostatistics with R
    A Rigorous and Practical Treatment of Biostatistics Foundations using R
    Ciprian Crainiceanu, Brian Caffo, and John Muschelli

    The book provides a modern look at introductory Biostatistical concepts and the associated computational tools using the latest developments in computation and visualization in the R language environment. The book includes practical data analysis based on datasets that can be downloaded here: https://github.com/muschellij2/biostatmethods.

  4. Probability of Default Rating Modeling with R
    Probability of Default Rating Modeling with R
    Comprehensive overview of the modeling processes, principles, and designs
    Andrija Djurovic

    This book bridges theory and practice in PD rating modeling, offering practical steps, real-world examples, and a focus on design. It enables readers to shape customized solutions for diverse institutions, transforming the landscape of credit risk modeling.

  5. Regression Models for Data Science in R
    Regression Models for Data Science in R
    A companion book for the Coursera Regression Models class
    Brian Caffo

    This book gives a brief, but rigorous, treatment of regression models intended for practicing Data Scientists.

  6. Data Analysis for the Life Sciences
    Data Analysis for the Life Sciences
    Rafael A Irizarry and Michael I Love

    Data analysis is now part of practically every research project in the life sciences. In this book we use data and computer code to teach the necessary statistical concepts and programming skills to become a data analyst. Instead of showing theory first and then applying it to toy examples, we start with actual applications and describe the theory as it becomes necessary to solve specific challenges. The book includes links to computer code that readers can use to follow along as they program.

  7. Exploratory Data Analysis with R

    This book teaches you to use R to effectively visualize and explore complex datasets. Exploratory data analysis is a key part of the data science process because it allows you to sharpen your question and refine your modeling strategies. This book is based on the industry-leading Johns Hopkins Data Science Specialization.

  8. Modern Computational Statistics with R
    Modern Computational Statistics with R
    An Introduction to Statistical Thinking, Uncertainty, and Evidence
    Osama Abdelhay

    Modern Computational Statistics with R teaches statistics as a disciplined way of thinking: start with the scientific question, design, data, and uncertainty before reaching for formulas. Through real examples, simulations, and R, readers learn how to turn data into defensible evidence and build the statistical foundations needed for modern data science, machine learning, and AI.

  9. Report Writing for Data Science in R

    This book teaches the fundamental concepts and tools behind reporting modern data analyses in a reproducible manner. As data analyses become increasingly complex, the need for clear and reproducible report writing is greater than ever. The material for this book was developed as part of the industry-leading Johns Hopkins Data Science Specialization. Printed versions are available through Lulu (see link below).

  10. Mastering Software Development in R
    Mastering Software Development in R
    Roger D. Peng, Sean Kross, and Brooke Anderson

    This book covers R software development for building data science tools. This book provides rigorous training in the R language and covers modern software development practices for building tools that are highly reusable, modular, and suitable for use in a team-based environment or a community of developers. (Printed copies coming soon!)

  11. Credit Risk Modeling Working Notes
    Credit Risk Modeling Working Notes
    A Collection of Presentations, Experiments, and Technical Papers
    Andrija Djurovic

    The Working Notes complement Applied Data Science for Credit Risk and Probability of Default Rating Modeling with R, offering practice-oriented insights. Based on the author’s GitHub repository, they address real-world challenges and are regularly updated to reflect ongoing developments.

  12. Biological Data Science with R

    Biological Data Science with R covers data manipulation with dplyr, visualization with ggplot2, essential statistics, survival analysis, RNA-seq analysis, phylogenetic trees, predictive modeling and infectious disease forecasting, text mining and natural language processing, and more.

  13. Advanced Linear Models for Data Science

    A rigorous treatment of linear models for self learning data scientists. This book is only available in pdf form.

  14. Mixed and Phylogenetic Models: A Conceptual Introduction to Correlated Data

    Are you confident your statistical results are correct? To answer this, you need to know the concepts behind statistics. This book, and R code, focus on data with correlated errors that arise in mixed models and phylogenetic models. It will hopefully give you confidence to judge statistical methods and the results they produce. The book is free!

  15. The Ultimate Cheat Sheet for Longitudinal Data Analysis in R
    The Ultimate Cheat Sheet for Longitudinal Data Analysis in R
    Learn key concepts, commands and analyses for longitudinal data analysis
    Alexandru Cernat

    Longitudinal data are powerful but complex, requiring new concepts, data structures, and models that can feel overwhelming to learn. This cheat sheet brings together the key ideas, R commands, and modelling approaches into a single workflow, helping you understand how everything fits together and providing the building blocks for mastering longitudinal data analysis.