GitHub Automation for Scientists (The Course)
Course Info
This course includes 1 attempt.
This course covers how to use GitHub actions for scientific software development. We encourage the recognition that scientific software can take many forms that can all benefit from the concepts of continuous integration and continuous deployment.
Target Audience
The course is intended for students in the biomedical sciences and researchers who use informatics tools in their research
This course is written for individuals who:
- Are comfortable with GitHub and know how to make a pull request
- Wish to save time and enhance their scientific projects using automation
- Perhaps previously tried to learn about GitHub Actions but felt overwhelmed on how to get started
Course Material
- 1 Introduction
- 2 Scientific software development best practices
- 3 Why Automation
- Why Automation Quiz10 attempts allowed
- 4 GitHub Actions Fundamentals
- GitHub Actions Fundamentals Quiz10 attempts allowed
- 5 Automating Re-running Analyses
- Automate Re-running Analyses Quiz10 attempts allowed
- 6 GitHub Action Variables
- GitHub Action Variables Quiz10 attempts allowed
- 7 Troubleshooting GitHub Actions
- Troubleshooting Quiz10 attempts allowed
- 8 Applying GitHub Actions Examples
- Applying GitHub Actions to your own project10 attempts allowed
- 9 References
- About this Course
- About the Authors
Instructors
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