Tools for Reproducible Research
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Tools for Reproducible Research

About the Book

Reproducibility of results is vital to science. This book is a collection of tools and workflows that have been developed to reproduce analytic results, with a focus on analysis done in R programming and Python languages and aims to help researchers and research students to develop their own digital archives.

About the Author

Soroor Hediyeh-Zadeh
Soroor Hediyeh-Zadeh

Soroor Hediyeh-Zadeh is a Research Assitant at the Bioinformatics Division, Walter and Eliza Hall Institute.

She graduated from The University of Melbourne with a Bachelor's degree in Science, majoring in Mathematics and Statistics. She started her research career in breast cancer systems biology as an undergraduate research student with Melissa Davis in 2014, and has been working as a RA since then. She is the author of OPPAR Bioconductor package, and an organiser of R-Ladies Melbourne group. She is interested in computational biology, R statistical programming language and reproducible research.

Table of Contents

  •  
    • Preface
    • Reproducible Research with Docker
      • Minimal Docker tutorial
      • Writing Dockerfiles
      • Building Docker Images
      • Running Docker Images
      • Docker commands cheatsheet
  • Notes

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