Bioconductor
Last updated on 2016-05-23
About the Book
The Bioconductor project is a widely used open source and open development platform for software for computational biology. It is a leading platform for doing data science in Genomics. This book covers the core functionality needed to deploy Bioconductor on modern datasets, and will lay the foundation for you to learn and explore parts of the project devoted to specific application domains.
You will learn about the core data classes in Bioconductor, tools for manipulating genomic intervals and genome sequences, tools for getting your data into Bioconductor and for accessing online annotation data. Finally, the book concludes with a number of short introductions to standard analysis packages.
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The Book
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The Book + Lecture Videos
This package includes the book as well as high-definition lecture videos (6 hours in total). The videos are licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 license.
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Instructional videos
Instructional videos associated with the book, for a total of more than 35 videos with a total length of 6 hours. The file format is mp4 and the total size is almost 8 GB. These videos have no subtitles. The audio is in english; note that the author does not have english as a first language.
English
PDF
EPUB
MOBI
APP
About the Author
Kasper D. Hansen is an Assistant Professor in the Department of Biostatistics and the Institute of Genetic Medicine at Johns Hopkins University. He is a co-director of the Johns Hopkins Specialization in Genomic Data Science and a member of the technical advisory board for the Bioconductor project. He can be found on Twitter @KasperDHansen. His scientific work can be found through his lab page.
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