Biological Data Science with R
Biological Data Science with R
About the Book
This book is a companion to a series of courses introducing the essentials of biological data science with R. While this book was written with the accompanying live instruction in mind, this book can be used as a self-contained self study guide for quickly learning the essentials need to get started with R. The BDSR book and accompanying course introduces methods, tools, and software for reproducibly managing, manipulating, analyzing, and visualizing large-scale biological data using the R statistical computing environment. This book also covers essential statistical analysis, and advanced topics including survival analysis, predictive modeling, forecasting, and text mining.
About the Author
Table of Contents
- Preface
-
Core Lessons
- 1. Basics
- 2. Tibbles
- 3. Data Manipulation
- 4. Data Visualization
- 5. Tidy EDA
- 6. RMarkdown
-
Electives
- 1. Essential Statistics
- 2. Survival Analysis
- 3. Predictive Modeling
- 4. Probabilistic Forecasting
- 5. Text Mining
- 6. Phylogenetic Trees
- 6. RNA-seq
- Summary
- References
-
Appendices
- A. Setup
- B. Additional Resources
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